Changelog
Source:NEWS.md
bioregion 1.1.1 (development/github version)
This is a list of changes made in the development/github version of the package between bioregion 1.1.0 (CRAN release 2024-03-19) and the next CRAN release.
- Updated automated tests [objective code coverage percentage > 60%]
bioregion 1.1.0
This is a list of changes made in the development/github version of the package between bioregion 1.0.0 (CRAN release 2023-04-15) and bioregion 1.1.0 (CRAN release 2024-03-19).
Added the resolution parameter in the igraph Louvain version
Added possibility to remove diagonal and lower triangular matrix in mat_to_net() for squared matrix with argument include_diag and include_lower
Added a function to extract a subset of node according to its type (sites or species) from a bioregion.clusters object containing both types of nodes (sites and species).
Added a generic function to maintain attributes of bioregion.pairwise.metric objects + keep track of number of sites and species
Functions added: nhclu_clara(), nhclu_clarans()
The corresponding vignettes are edited to document the new functions.
Modification of the way ‘bioregion.pairwise.metric’ object are controlled.
Allow to (not) select ‘formula metrics’ in similarity_dissimilarity_conversion() with the new argument “include_formula”.
Allow negative values in similarity() with the Euclidean metric.